Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fam228aQ8CDW1 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm11660-201ENSMUST00000120955 412 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm13786-201ENSMUST00000122371 333 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm18187-201ENSMUST00000196476 984 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm19187-201ENSMUST00000206781 892 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm10608-202ENSMUST00000213924 676 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm2553-201ENSMUST00000215986 605 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Gm5455-201ENSMUST00000058710 715 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fam228aQ8CDW1 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm5187-201ENSMUST00000117317 991 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm15824-201ENSMUST00000119516 955 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm11793-201ENSMUST00000120433 981 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm6963-201ENSMUST00000147879 379 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Snora78-201ENSMUST00000158630 128 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm5070-201ENSMUST00000177599 862 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm3096-201ENSMUST00000185770 364 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gm19309-201ENSMUST00000218295 205 ntBASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fam228aQ8CDW1 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fam228aQ8CDW1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms