Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccdc87Q8CDL9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm6963-201ENSMUST00000147879 379 ntBASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm25700-201ENSMUST00000177693 110 ntBASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc87Q8CDL9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm12015-201ENSMUST00000117065 843 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Rprl1-202ENSMUST00000198476 238 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccdc87Q8CDL9 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms