Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.7□□□□□ -0.38
Prpf31Q8CCF0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf31Q8CCF0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Prpf31Q8CCF0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.7□□□□□ -0.38
Prpf31Q8CCF0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Prpf31Q8CCF0 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Prpf31Q8CCF0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Prpf31Q8CCF0 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm25076-201ENSMUST00000104098 132 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm6485-201ENSMUST00000160676 439 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm7504-201ENSMUST00000201449 424 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm18065-201ENSMUST00000221395 526 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.68□□□□□ -0.38
Prpf31Q8CCF0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf31Q8CCF0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms