Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
SynpoQ8CC35 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm24891-201ENSMUST00000104391 136 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm7722-201ENSMUST00000120646 741 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm9136-201ENSMUST00000193368 454 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm1821-202ENSMUST00000227415 750 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Ntng1-201ENSMUST00000051253 327 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SynpoQ8CC35 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.25□□□□□ -0.61
SynpoQ8CC35 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm12165-201ENSMUST00000117047 342 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm23085-201ENSMUST00000157849 293 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm19353-201ENSMUST00000184561 445 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm4482-201ENSMUST00000200876 742 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm9555-201ENSMUST00000200908 583 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm6905-201ENSMUST00000205729 511 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.24□□□□□ -0.61
SynpoQ8CC35 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SynpoQ8CC35 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms