Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm14071-201ENSMUST00000117817 509 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm11500-201ENSMUST00000118237 601 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm15329-201ENSMUST00000121408 155 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm15549-201ENSMUST00000121595 622 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Mir6958-201ENSMUST00000184207 73 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm37028-201ENSMUST00000194276 107 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Gm23680-201ENSMUST00000083162 164 ntBASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sh3rf2Q8BZT2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm22442-201ENSMUST00000157256 144 ntBASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm29155-201ENSMUST00000185910 269 ntBASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sh3rf2Q8BZT2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Sh3rf2Q8BZT2 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms