Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm2991-201ENSMUST00000173338 480 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm32999-201ENSMUST00000192693 562 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm43433-201ENSMUST00000196573 481 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Rprl1-202ENSMUST00000198476 238 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm6439-201ENSMUST00000199849 862 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm6450-201ENSMUST00000200896 574 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Cdhr3Q8BL00 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm12957-201ENSMUST00000117835 377 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm11500-201ENSMUST00000118237 601 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm12241-201ENSMUST00000118330 726 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm27501-201ENSMUST00000183599 107 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Mir8093-201ENSMUST00000185043 137 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm5982-201ENSMUST00000196234 512 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Cdhr3Q8BL00 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms