Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm11511-201ENSMUST00000118146 540 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm20482-202ENSMUST00000174729 825 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rnf38Q8BI21 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Gm13350-201ENSMUST00000120519 479 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Gm7584-201ENSMUST00000175829 940 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Gm27046-201ENSMUST00000182160 463 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Gm37259-201ENSMUST00000193903 849 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.19□□□□□ -0.62
Rnf38Q8BI21 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms