Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Scaf4Q6PFF0 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm12463-201ENSMUST00000118271 849 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Mir8093-201ENSMUST00000185043 137 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm5982-201ENSMUST00000196234 512 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm19187-201ENSMUST00000206781 892 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gm19309-201ENSMUST00000218295 205 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Scaf4Q6PFF0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Scaf4Q6PFF0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.4□□□□□ -0.59
Scaf4Q6PFF0 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Scaf4Q6PFF0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm26286-201ENSMUST00000104166 134 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm11660-201ENSMUST00000120955 412 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm13786-201ENSMUST00000122371 333 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm6963-201ENSMUST00000147879 379 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm5070-201ENSMUST00000177599 862 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm38002-201ENSMUST00000193255 180 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Scaf4Q6PFF0 Gm6450-201ENSMUST00000200896 574 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 116.9 ms