Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Gm22937-201ENSMUST00000103954 131 ntBASIC13.42□□□□□ -0.26
Nup98Q6PFD9 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nup98Q6PFD9 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm16459-201ENSMUST00000121443 686 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm43969-201ENSMUST00000204833 535 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm44605-201ENSMUST00000206892 949 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Mir671-201ENSMUST00000102432 98 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm9162-201ENSMUST00000182081 991 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Platr10-202ENSMUST00000191479 818 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm5267-201ENSMUST00000191574 1045 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm17889-201ENSMUST00000198410 598 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm45500-201ENSMUST00000211676 803 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nup98Q6PFD9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.4□□□□□ -0.26
Nup98Q6PFD9 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nup98Q6PFD9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nup98Q6PFD9 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC13.39□□□□□ -0.27
Nup98Q6PFD9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms