Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 AC131029.1-201ENSMUST00000226391 2929 ntBASIC12.32□□□□□ -0.44
CtifQ6PEE2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CtifQ6PEE2 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gm9002-201ENSMUST00000178437 499 ntBASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gm19994-201ENSMUST00000217086 586 ntBASIC12.31□□□□□ -0.44
CtifQ6PEE2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.31□□□□□ -0.44
CtifQ6PEE2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CtifQ6PEE2 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm13612-201ENSMUST00000119276 390 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm5419-201ENSMUST00000119301 527 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm11573-201ENSMUST00000119956 394 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm10146-201ENSMUST00000072739 309 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm22058-201ENSMUST00000083393 310 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.3□□□□□ -0.44
CtifQ6PEE2 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CtifQ6PEE2 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms