Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm22594-201ENSMUST00000104251 130 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm14234-201ENSMUST00000119539 845 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm37852-201ENSMUST00000193027 350 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm42430-201ENSMUST00000197209 616 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm6855-201ENSMUST00000206307 790 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm40879-201ENSMUST00000220759 612 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Snrnp40Q6PE01 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm8111-201ENSMUST00000117659 987 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm14497-201ENSMUST00000119537 580 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm5909-201ENSMUST00000119768 1281 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm20495-201ENSMUST00000173902 235 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm25677-201ENSMUST00000174983 72 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Trav11n-201ENSMUST00000200113 343 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Gm8181-201ENSMUST00000062242 669 ntBASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Snrnp40Q6PE01 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms