Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm32999-201ENSMUST00000192693 562 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm5982-201ENSMUST00000196234 512 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm6450-201ENSMUST00000200896 574 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm45224-201ENSMUST00000208203 414 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.78□□□□□ -0.36
Krt39Q6IFX4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Krt39Q6IFX4 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm15276-201ENSMUST00000145953 498 ntBASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm13097-201ENSMUST00000210722 397 ntBASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Krt39Q6IFX4 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Krt39Q6IFX4 Mir877-201ENSMUST00000104738 85 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms