Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scube3Q66PY1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scube3Q66PY1 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scube3Q66PY1 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scube3Q66PY1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scube3Q66PY1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Scube3Q66PY1 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm8199-201ENSMUST00000121323 823 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm43378-201ENSMUST00000199336 582 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.4□□□□□ -0.42
Scube3Q66PY1 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scube3Q66PY1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scube3Q66PY1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Scube3Q66PY1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Scube3Q66PY1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Scube3Q66PY1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Scube3Q66PY1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Scube3Q66PY1 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Scube3Q66PY1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm23699-201ENSMUST00000158835 135 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm28941-201ENSMUST00000185536 1017 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scube3Q66PY1 Gm6867-201ENSMUST00000219165 425 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC12.39□□□□□ -0.43
Scube3Q66PY1 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms