Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox17Q61473 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox17Q61473 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Gm8131-201ENSMUST00000213783 1570 ntBASIC10.82□□□□□ -0.68
Sox17Q61473 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox17Q61473 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox17Q61473 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sox17Q61473 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox17Q61473 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox17Q61473 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox17Q61473 Gm6023-201ENSMUST00000118217 606 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox17Q61473 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sox17Q61473 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox17Q61473 Gm5950-201ENSMUST00000213337 772 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox17Q61473 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 AA474408-201ENSMUST00000098110 3339 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.81□□□□□ -0.68
Sox17Q61473 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sox17Q61473 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox17Q61473 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox17Q61473 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.8□□□□□ -0.68
Sox17Q61473 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sox17Q61473 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.8□□□□□ -0.68
Sox17Q61473 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sox17Q61473 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.8□□□□□ -0.68
Sox17Q61473 Gm38158-201ENSMUST00000194617 339 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms