Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.78□□□□□ -0.36
Ift88Q61371 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ift88Q61371 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ift88Q61371 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.77□□□□□ -0.36
Ift88Q61371 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.77□□□□□ -0.36
Ift88Q61371 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ift88Q61371 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ift88Q61371 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ift88Q61371 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ift88Q61371 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.77□□□□□ -0.36
Ift88Q61371 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.77□□□□□ -0.36
Ift88Q61371 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Gm4310-201ENSMUST00000177847 889 ntBASIC12.77□□□□□ -0.37
Ift88Q61371 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.77□□□□□ -0.37
Ift88Q61371 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.77□□□□□ -0.37
Ift88Q61371 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.77□□□□□ -0.37
Ift88Q61371 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.77□□□□□ -0.37
Ift88Q61371 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ift88Q61371 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.77□□□□□ -0.37
Ift88Q61371 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.77□□□□□ -0.37
Ift88Q61371 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ift88Q61371 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ift88Q61371 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ift88Q61371 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.76□□□□□ -0.37
Ift88Q61371 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.76□□□□□ -0.37
Ift88Q61371 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Gm14071-201ENSMUST00000117817 509 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Gm13296-201ENSMUST00000117854 997 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.76□□□□□ -0.37
Ift88Q61371 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm4157-201ENSMUST00000211647 679 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm9797-202ENSMUST00000218003 294 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm7399-201ENSMUST00000032395 858 ntBASIC12.76□□□□□ -0.37
Ift88Q61371 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ift88Q61371 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ift88Q61371 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ift88Q61371 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms