Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm12748-201ENSMUST00000120763 504 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Rmrp-201ENSMUST00000157463 271 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm36974-201ENSMUST00000194200 1071 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm38266-201ENSMUST00000194931 421 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm43136-201ENSMUST00000200403 636 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm5904-201ENSMUST00000210286 865 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Foxd4Q60688 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.44□□□□□ -0.42
Foxd4Q60688 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxd4Q60688 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm43670-201ENSMUST00000199047 1767 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm42766-201ENSMUST00000200233 1332 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm24231-201ENSMUST00000104315 133 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm13732-201ENSMUST00000117753 535 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm11591-201ENSMUST00000120063 702 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm14760-201ENSMUST00000121831 999 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm6542-201ENSMUST00000153606 772 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC12.43□□□□□ -0.42
Foxd4Q60688 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm43104-201ENSMUST00000197234 311 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm43133-201ENSMUST00000197472 463 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm43758-201ENSMUST00000199500 367 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Foxd4Q60688 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm10145-201ENSMUST00000077776 462 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm10705-201ENSMUST00000098980 461 ntBASIC12.43□□□□□ -0.42
Foxd4Q60688 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Foxd4Q60688 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxd4Q60688 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms