Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.05□□□□□ -0.64
Nr1h4Q60641 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.05□□□□□ -0.64
Nr1h4Q60641 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nr1h4Q60641 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm13297-201ENSMUST00000120205 934 ntBASIC11.04□□□□□ -0.64
Nr1h4Q60641 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm13786-201ENSMUST00000122371 333 ntBASIC11.04□□□□□ -0.64
Nr1h4Q60641 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm38002-201ENSMUST00000193255 180 ntBASIC11.04□□□□□ -0.64
Nr1h4Q60641 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.04□□□□□ -0.64
Nr1h4Q60641 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.04□□□□□ -0.64
Nr1h4Q60641 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nr1h4Q60641 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.03□□□□□ -0.64
Nr1h4Q60641 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.03□□□□□ -0.64
Nr1h4Q60641 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.03□□□□□ -0.64
Nr1h4Q60641 Gm19187-201ENSMUST00000206781 892 ntBASIC11.03□□□□□ -0.64
Nr1h4Q60641 Gm19309-201ENSMUST00000218295 205 ntBASIC11.03□□□□□ -0.64
Nr1h4Q60641 Gm8712-201ENSMUST00000221090 701 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms