Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Herc2Q4U2R1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Fam187b-202ENSMUST00000128384 1244 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm16329-201ENSMUST00000148174 371 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm24180-201ENSMUST00000179961 110 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm19090-201ENSMUST00000218187 774 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm43165-201ENSMUST00000200842 1635 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm5046-201ENSMUST00000100608 611 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm12338-201ENSMUST00000122170 192 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Mir6940-201ENSMUST00000183447 70 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm30652-201ENSMUST00000199103 430 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm15172-201ENSMUST00000118945 1046 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm15606-202ENSMUST00000139851 711 ntTSL 3 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm44388-201ENSMUST00000204350 258 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm3889-201ENSMUST00000212467 612 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC122858.2-201ENSMUST00000228571 1362 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC124561.1-202ENSMUST00000228652 1929 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC153524.2-202ENSMUST00000220401 1794 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Snora68-201ENSMUST00000104375 131 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm12619-201ENSMUST00000117369 385 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm15355-201ENSMUST00000118929 285 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Gm6426-201ENSMUST00000209048 854 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC140393.4-201ENSMUST00000226994 765 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 AC153566.1-201ENSMUST00000216441 2057 ntBASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
Herc2Q4U2R1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Herc2Q4U2R1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Herc2Q4U2R1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Herc2Q4U2R1 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Herc2Q4U2R1 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC6.61□□□□□ -1.35
Herc2Q4U2R1 Gm7158-201ENSMUST00000120079 903 ntBASIC6.61□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms