Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm4294-201ENSMUST00000105169 614 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm12389-201ENSMUST00000117696 418 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Mir7035-201ENSMUST00000184713 82 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm43506-201ENSMUST00000200675 753 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm6478-201ENSMUST00000099450 742 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.69□□□□□ -0.54
Fam196aQ3USH1 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm15329-201ENSMUST00000121408 155 ntBASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm37851-201ENSMUST00000193871 889 ntBASIC11.68□□□□□ -0.54
Fam196aQ3USH1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.68□□□□□ -0.54
Fam196aQ3USH1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms