Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nlrc4Q3UP24 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm11836-201ENSMUST00000121022 441 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm4726-201ENSMUST00000135604 736 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm6019-201ENSMUST00000148369 736 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm9211-201ENSMUST00000182882 975 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Gm7504-201ENSMUST00000201449 424 ntBASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nlrc4Q3UP24 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nlrc4Q3UP24 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Gm2517-201ENSMUST00000215651 348 ntBASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.2□□□□□ -0.46
Nlrc4Q3UP24 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nlrc4Q3UP24 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms