Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trpm1Q2TV84 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Trpm1Q2TV84 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trpm1Q2TV84 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trpm1Q2TV84 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Gm14148-201ENSMUST00000122433 1008 ntBASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 AC129217.1-201ENSMUST00000225181 642 ntBASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Gm5278-201ENSMUST00000055957 552 ntBASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trpm1Q2TV84 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm22388-201ENSMUST00000158194 248 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm8525-201ENSMUST00000189674 861 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm29689-201ENSMUST00000221076 589 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 AC163638.2-201ENSMUST00000224920 827 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Trpm1Q2TV84 AC122273.1-201ENSMUST00000213634 2327 ntBASIC16.08■□□□□ 0.16
Trpm1Q2TV84 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Gm3527-201ENSMUST00000198905 460 ntBASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 AC157950.1-201ENSMUST00000217561 2168 ntBASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trpm1Q2TV84 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm24346-201ENSMUST00000158712 194 ntBASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm4868-201ENSMUST00000164138 789 ntBASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm38349-201ENSMUST00000195732 462 ntBASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Gm25514-201ENSMUST00000083860 135 ntBASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trpm1Q2TV84 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms