Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm11667-201ENSMUST00000119828 486 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm14585-201ENSMUST00000120713 634 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm44506-201ENSMUST00000206278 965 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm45550-201ENSMUST00000209380 946 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cntn3Q07409 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cntn3Q07409 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.18□□□□□ -0.46
Cntn3Q07409 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm14460-201ENSMUST00000121511 639 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm43186-201ENSMUST00000198130 824 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm44551-201ENSMUST00000208804 171 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.17□□□□□ -0.46
Cntn3Q07409 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cntn3Q07409 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.17□□□□□ -0.46
Cntn3Q07409 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.16□□□□□ -0.46
Cntn3Q07409 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cntn3Q07409 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cntn3Q07409 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms