Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox9Q04887 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox9Q04887 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox9Q04887 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox9Q04887 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox9Q04887 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox9Q04887 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.01□□□□□ -0.49
Sox9Q04887 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Sox9Q04887 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox9Q04887 Gm42432-201ENSMUST00000197902 1617 ntBASIC12□□□□□ -0.49
Sox9Q04887 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12□□□□□ -0.49
Sox9Q04887 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12□□□□□ -0.49
Sox9Q04887 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox9Q04887 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12□□□□□ -0.49
Sox9Q04887 Gm13171-201ENSMUST00000117233 391 ntBASIC12□□□□□ -0.49
Sox9Q04887 Gm12461-201ENSMUST00000120231 1239 ntBASIC12□□□□□ -0.49
Sox9Q04887 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12□□□□□ -0.49
Sox9Q04887 Gm6612-201ENSMUST00000170777 395 ntBASIC12□□□□□ -0.49
Sox9Q04887 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12□□□□□ -0.49
Sox9Q04887 Gm29304-201ENSMUST00000186555 695 ntBASIC12□□□□□ -0.49
Sox9Q04887 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12□□□□□ -0.49
Sox9Q04887 Gm29223-201ENSMUST00000188867 695 ntBASIC12□□□□□ -0.49
Sox9Q04887 Gm5267-201ENSMUST00000191574 1045 ntBASIC12□□□□□ -0.49
Sox9Q04887 Gm2345-201ENSMUST00000193451 589 ntBASIC12□□□□□ -0.49
Sox9Q04887 Gm37921-201ENSMUST00000194333 695 ntBASIC12□□□□□ -0.49
Sox9Q04887 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 AC137871.1-201ENSMUST00000228278 475 ntBASIC12□□□□□ -0.49
Sox9Q04887 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gm6564-201ENSMUST00000075377 619 ntBASIC12□□□□□ -0.49
Sox9Q04887 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Sox9Q04887 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gm9415-201ENSMUST00000200462 1321 ntBASIC12□□□□□ -0.49
Sox9Q04887 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Sox9Q04887 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Gm37348-201ENSMUST00000193104 1789 ntBASIC12□□□□□ -0.49
Sox9Q04887 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox9Q04887 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Sox9Q04887 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.99□□□□□ -0.49
Sox9Q04887 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox9Q04887 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Sox9Q04887 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox9Q04887 Gm23595-201ENSMUST00000104306 130 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Gm12418-201ENSMUST00000118116 942 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox9Q04887 Gm26976-201ENSMUST00000182929 908 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox9Q04887 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.99□□□□□ -0.49
Sox9Q04887 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 Gm8255-201ENSMUST00000218693 305 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 AC154759.1-201ENSMUST00000224137 1159 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.99□□□□□ -0.49
Sox9Q04887 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox9Q04887 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox9Q04887 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Sox9Q04887 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox9Q04887 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms