Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a1Q04857 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a1Q04857 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.84□□□□□ -0.35
Col6a1Q04857 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a1Q04857 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a1Q04857 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a1Q04857 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm25053-201ENSMUST00000103982 133 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm25922-201ENSMUST00000104281 130 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm22846-201ENSMUST00000157706 270 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm24679-201ENSMUST00000158762 111 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm7719-201ENSMUST00000182374 975 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm42433-201ENSMUST00000196806 940 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm25053-202ENSMUST00000199731 132 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Trav11n-201ENSMUST00000200113 343 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.83□□□□□ -0.36
Col6a1Q04857 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.83□□□□□ -0.36
Col6a1Q04857 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col6a1Q04857 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm14270-201ENSMUST00000118388 846 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm20414-201ENSMUST00000172918 646 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm8574-201ENSMUST00000203207 924 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.82□□□□□ -0.36
Col6a1Q04857 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Col6a1Q04857 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col6a1Q04857 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a1Q04857 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a1Q04857 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a1Q04857 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a1Q04857 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.81□□□□□ -0.36
Col6a1Q04857 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col6a1Q04857 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.81□□□□□ -0.36
Col6a1Q04857 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col6a1Q04857 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms