Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.42□□□□□ -0.42
VcpQ01853 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
VcpQ01853 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VcpQ01853 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VcpQ01853 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VcpQ01853 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.41□□□□□ -0.42
VcpQ01853 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.41□□□□□ -0.42
VcpQ01853 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
VcpQ01853 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.41□□□□□ -0.42
VcpQ01853 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
VcpQ01853 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VcpQ01853 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
VcpQ01853 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VcpQ01853 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VcpQ01853 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
VcpQ01853 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
VcpQ01853 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.4□□□□□ -0.42
VcpQ01853 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.4□□□□□ -0.42
VcpQ01853 Gm7541-201ENSMUST00000118361 535 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Gm13937-201ENSMUST00000121000 988 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Gm12164-201ENSMUST00000121695 551 ntBASIC12.4□□□□□ -0.42
VcpQ01853 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.4□□□□□ -0.42
VcpQ01853 Gm22144-201ENSMUST00000157402 102 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.4□□□□□ -0.42
VcpQ01853 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.4□□□□□ -0.42
VcpQ01853 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
VcpQ01853 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Gm44329-201ENSMUST00000197469 112 ntBASIC12.4□□□□□ -0.42
VcpQ01853 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.4□□□□□ -0.42
VcpQ01853 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.4□□□□□ -0.42
VcpQ01853 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VcpQ01853 Gm25201-201ENSMUST00000083093 170 ntBASIC12.4□□□□□ -0.42
VcpQ01853 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms