Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GabpaQ00422 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GabpaQ00422 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GabpaQ00422 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
GabpaQ00422 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.12□□□□□ -0.31
GabpaQ00422 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm10169-201ENSMUST00000121822 348 ntBASIC13.12□□□□□ -0.31
GabpaQ00422 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.12□□□□□ -0.31
GabpaQ00422 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.12□□□□□ -0.31
GabpaQ00422 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.12□□□□□ -0.31
GabpaQ00422 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.12□□□□□ -0.31
GabpaQ00422 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.12□□□□□ -0.31
GabpaQ00422 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.12□□□□□ -0.31
GabpaQ00422 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
GabpaQ00422 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
GabpaQ00422 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GabpaQ00422 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.12□□□□□ -0.31
GabpaQ00422 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GabpaQ00422 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GabpaQ00422 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
GabpaQ00422 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GabpaQ00422 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.11□□□□□ -0.31
GabpaQ00422 Gm13422-201ENSMUST00000118834 504 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Gm12990-201ENSMUST00000120372 468 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Gm13117-201ENSMUST00000120894 691 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Gm12030-201ENSMUST00000121917 223 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.11□□□□□ -0.31
GabpaQ00422 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.11□□□□□ -0.31
GabpaQ00422 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
GabpaQ00422 Gm42816-201ENSMUST00000198433 325 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 CT009527.1-201ENSMUST00000224205 339 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.11□□□□□ -0.31
GabpaQ00422 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GabpaQ00422 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.1□□□□□ -0.31
GabpaQ00422 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.1□□□□□ -0.31
GabpaQ00422 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
GabpaQ00422 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
GabpaQ00422 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.1□□□□□ -0.31
GabpaQ00422 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.1□□□□□ -0.31
GabpaQ00422 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.1□□□□□ -0.31
GabpaQ00422 Gm23694-201ENSMUST00000179335 110 ntBASIC13.1□□□□□ -0.31
GabpaQ00422 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.1□□□□□ -0.31
GabpaQ00422 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.1□□□□□ -0.31
GabpaQ00422 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.1□□□□□ -0.31
GabpaQ00422 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms