Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.74□□□□□ -0.37
Lig3P97386 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.74□□□□□ -0.37
Lig3P97386 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lig3P97386 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lig3P97386 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Lig3P97386 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.73□□□□□ -0.37
Lig3P97386 Gm14760-201ENSMUST00000121831 999 ntBASIC12.73□□□□□ -0.37
Lig3P97386 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.73□□□□□ -0.37
Lig3P97386 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.73□□□□□ -0.37
Lig3P97386 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.73□□□□□ -0.37
Lig3P97386 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.73□□□□□ -0.37
Lig3P97386 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.73□□□□□ -0.37
Lig3P97386 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.73□□□□□ -0.37
Lig3P97386 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lig3P97386 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm11451-201ENSMUST00000118946 630 ntBASIC12.72□□□□□ -0.37
Lig3P97386 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Gm12628-201ENSMUST00000122193 382 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.72□□□□□ -0.37
Lig3P97386 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.72□□□□□ -0.37
Lig3P97386 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm27390-201ENSMUST00000184516 176 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.72□□□□□ -0.37
Lig3P97386 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Gm17831-201ENSMUST00000205579 900 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.72□□□□□ -0.37
Lig3P97386 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 Gm9996-201ENSMUST00000070359 913 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lig3P97386 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.72□□□□□ -0.37
Lig3P97386 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Lig3P97386 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lig3P97386 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms