Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim43bP86448 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Gm24934-201ENSMUST00000103764 111 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim43bP86448 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim43bP86448 Gm24990-201ENSMUST00000157406 323 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim43bP86448 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim43bP86448 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 Gzmn-202ENSMUST00000225535 989 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim43bP86448 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim43bP86448 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim43bP86448 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trim43bP86448 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.95□□□□□ -0.5
Trim43bP86448 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim43bP86448 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim43bP86448 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm14247-201ENSMUST00000120950 237 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm14277-201ENSMUST00000121195 360 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim43bP86448 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm25700-201ENSMUST00000177693 110 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm42937-201ENSMUST00000197360 752 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Gm18711-201ENSMUST00000199341 750 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Gm17931-201ENSMUST00000208132 634 ntBASIC11.94□□□□□ -0.5
Trim43bP86448 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim43bP86448 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim43bP86448 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim43bP86448 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.93□□□□□ -0.5
Trim43bP86448 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim43bP86448 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim43bP86448 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim43bP86448 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim43bP86448 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms