Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shox2P70390 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shox2P70390 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.41□□□□□ -0.58
Shox2P70390 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.41□□□□□ -0.58
Shox2P70390 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.4□□□□□ -0.58
Shox2P70390 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.4□□□□□ -0.58
Shox2P70390 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shox2P70390 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shox2P70390 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shox2P70390 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.4□□□□□ -0.58
Shox2P70390 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shox2P70390 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.4□□□□□ -0.58
Shox2P70390 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.4□□□□□ -0.58
Shox2P70390 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.4□□□□□ -0.58
Shox2P70390 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.4□□□□□ -0.58
Shox2P70390 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Shox2P70390 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.4□□□□□ -0.58
Shox2P70390 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Gm19287-201ENSMUST00000203190 358 ntBASIC11.4□□□□□ -0.58
Shox2P70390 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.4□□□□□ -0.58
Shox2P70390 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shox2P70390 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.4□□□□□ -0.58
Shox2P70390 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.4□□□□□ -0.58
Shox2P70390 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.4□□□□□ -0.58
Shox2P70390 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.4□□□□□ -0.58
Shox2P70390 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Shox2P70390 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shox2P70390 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shox2P70390 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.59
Shox2P70390 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.59
Shox2P70390 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shox2P70390 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Shox2P70390 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.39□□□□□ -0.59
Shox2P70390 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.39□□□□□ -0.59
Shox2P70390 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.39□□□□□ -0.59
Shox2P70390 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shox2P70390 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shox2P70390 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.39□□□□□ -0.59
Shox2P70390 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.39□□□□□ -0.59
Shox2P70390 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.39□□□□□ -0.59
Shox2P70390 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.39□□□□□ -0.59
Shox2P70390 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.39□□□□□ -0.59
Shox2P70390 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.39□□□□□ -0.59
Shox2P70390 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.39□□□□□ -0.59
Shox2P70390 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Shox2P70390 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shox2P70390 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Shox2P70390 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.39□□□□□ -0.59
Shox2P70390 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms