Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.87□□□□□ -0.51
Ybx1P62960 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.87□□□□□ -0.51
Ybx1P62960 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.87□□□□□ -0.51
Ybx1P62960 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm43163-201ENSMUST00000196571 442 ntBASIC11.87□□□□□ -0.51
Ybx1P62960 Gm17889-201ENSMUST00000198410 598 ntBASIC11.87□□□□□ -0.51
Ybx1P62960 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm18514-201ENSMUST00000218980 436 ntBASIC11.87□□□□□ -0.51
Ybx1P62960 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.87□□□□□ -0.51
Ybx1P62960 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm25201-201ENSMUST00000083093 170 ntBASIC11.87□□□□□ -0.51
Ybx1P62960 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.87□□□□□ -0.51
Ybx1P62960 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ybx1P62960 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ybx1P62960 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ybx1P62960 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ybx1P62960 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ybx1P62960 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm9135-201ENSMUST00000182963 990 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Ybx1P62960 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm43380-201ENSMUST00000200421 220 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Gm39288-201ENSMUST00000210554 446 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Gm5996-201ENSMUST00000211110 718 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.86□□□□□ -0.51
Ybx1P62960 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Gm18968-201ENSMUST00000221319 862 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ybx1P62960 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.86□□□□□ -0.51
Ybx1P62960 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ybx1P62960 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.85□□□□□ -0.51
Ybx1P62960 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ybx1P62960 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ybx1P62960 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms