Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm4986-201ENSMUST00000119731 549 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.22□□□□□ -1.09
Rpl39P62892 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm2639-201ENSMUST00000156881 1297 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm9192-201ENSMUST00000183221 985 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm38114-201ENSMUST00000191877 1232 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Gm42627-201ENSMUST00000197347 224 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm40466-201ENSMUST00000212174 422 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Rpl39P62892 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 AC122459.1-201ENSMUST00000228373 885 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 AC158982.1-201ENSMUST00000228377 901 ntBASIC8.22□□□□□ -1.09
Rpl39P62892 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC8.22□□□□□ -1.09
Rpl39P62892 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC8.22□□□□□ -1.09
Rpl39P62892 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC8.22□□□□□ -1.09
Rpl39P62892 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Rpl39P62892 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Rpl39P62892 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Gm45532-201ENSMUST00000210342 3620 ntBASIC8.21□□□□□ -1.09
Rpl39P62892 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Gm19221-201ENSMUST00000221827 1477 ntBASIC8.21□□□□□ -1.09
Rpl39P62892 Adgrv1-214ENSMUST00000224088 1492 ntBASIC8.21□□□□□ -1.09
Rpl39P62892 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.09
Rpl39P62892 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Rpl39P62892 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
Rpl39P62892 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl39P62892 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl39P62892 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl39P62892 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC8.21□□□□□ -1.1
Rpl39P62892 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Gm14832-201ENSMUST00000121289 322 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC8.21□□□□□ -1.1
Rpl39P62892 Gm13316-201ENSMUST00000140537 691 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Gm25261-201ENSMUST00000157416 134 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Gm24845-201ENSMUST00000158034 109 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Gm16379-201ENSMUST00000161469 348 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Gm8801-201ENSMUST00000173255 1064 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl39P62892 Gm29127-201ENSMUST00000188304 517 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Gm8762-201ENSMUST00000193486 339 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Rpl39P62892 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC8.21□□□□□ -1.1
Rpl39P62892 Gm5035-201ENSMUST00000215581 927 ntBASIC8.21□□□□□ -1.1
Rpl39P62892 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl39P62892 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Rpl39P62892 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms