Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm7353-201ENSMUST00000069044 2866 ntBASIC6.59□□□□□ -1.36
Rps28P62858 Top3a-201ENSMUST00000002891 3741 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rps28P62858 Ttc16-205ENSMUST00000161089 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rps28P62858 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Rps28P62858 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rps28P62858 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Rps28P62858 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Rps28P62858 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Rps28P62858 Mmrn2-201ENSMUST00000111908 3974 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Rps28P62858 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Rps28P62858 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Rps28P62858 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Myo1g-201ENSMUST00000003459 3307 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 AC122858.2-201ENSMUST00000228571 1362 ntBASIC6.58□□□□□ -1.36
Rps28P62858 Pcdhb12-201ENSMUST00000055495 3034 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Rps28P62858 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC6.58□□□□□ -1.36
Rps28P62858 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gm37446-201ENSMUST00000193015 4136 ntBASIC6.58□□□□□ -1.36
Rps28P62858 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC6.58□□□□□ -1.36
Rps28P62858 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gm11652-201ENSMUST00000117842 1267 ntBASIC6.58□□□□□ -1.36
Rps28P62858 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Gm25661-201ENSMUST00000157704 296 ntBASIC6.58□□□□□ -1.36
Rps28P62858 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 1700061E17Rik-201ENSMUST00000185439 1067 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC6.58□□□□□ -1.36
Rps28P62858 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Rps28P62858 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Helb-201ENSMUST00000020449 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gm6733-201ENSMUST00000118302 1920 ntBASIC6.58□□□□□ -1.36
Rps28P62858 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Ccdc33-203ENSMUST00000098682 3117 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Tulp2-204ENSMUST00000107759 1675 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Gm42515-201ENSMUST00000199936 3583 ntBASIC6.58□□□□□ -1.36
Rps28P62858 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 AC154377.1-201ENSMUST00000226752 4979 ntBASIC6.58□□□□□ -1.36
Rps28P62858 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Gm37084-201ENSMUST00000191688 5898 ntBASIC6.58□□□□□ -1.36
Rps28P62858 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC6.58□□□□□ -1.36
Rps28P62858 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Rps28P62858 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Zcchc18-203ENSMUST00000113067 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Foxp3-201ENSMUST00000045566 3572 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm43785-201ENSMUST00000201036 1345 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Rps28P62858 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC6.57□□□□□ -1.36
Rps28P62858 Zfp709-203ENSMUST00000188685 7186 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm26628-201ENSMUST00000181028 1719 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rps28P62858 Gm45768-201ENSMUST00000206763 3202 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Gm45153-201ENSMUST00000205957 1901 ntBASIC6.57□□□□□ -1.36
Rps28P62858 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms