Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Lsm3P62311 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Gm12502-201ENSMUST00000120197 444 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Gm11960-201ENSMUST00000122068 925 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.48□□□□□ -0.73
Lsm3P62311 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Lsm3P62311 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Gm18711-201ENSMUST00000199341 750 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm18624-201ENSMUST00000220966 658 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Lsm3P62311 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Lsm3P62311 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.48□□□□□ -0.73
Lsm3P62311 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Lsm3P62311 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.48□□□□□ -0.73
Lsm3P62311 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Lsm3P62311 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.47□□□□□ -0.73
Lsm3P62311 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.47□□□□□ -0.73
Lsm3P62311 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.47□□□□□ -0.73
Lsm3P62311 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.47□□□□□ -0.73
Lsm3P62311 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Lsm3P62311 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
Lsm3P62311 Gm37917-201ENSMUST00000194711 392 ntBASIC10.47□□□□□ -0.73
Lsm3P62311 Gm38314-201ENSMUST00000195709 625 ntBASIC10.47□□□□□ -0.73
Lsm3P62311 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.47□□□□□ -0.73
Lsm3P62311 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.47□□□□□ -0.73
Lsm3P62311 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Lsm3P62311 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Lsm3P62311 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms