Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Gm23699-201ENSMUST00000158835 135 ntBASIC10.95□□□□□ -0.66
Nup43P59235 Gm8459-201ENSMUST00000162504 760 ntBASIC10.95□□□□□ -0.66
Nup43P59235 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.95□□□□□ -0.66
Nup43P59235 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Gm10774-201ENSMUST00000188689 204 ntBASIC10.95□□□□□ -0.66
Nup43P59235 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Ginm1-202ENSMUST00000065124 300 ntBASIC10.95□□□□□ -0.66
Nup43P59235 Gm4978-201ENSMUST00000071565 801 ntBASIC10.95□□□□□ -0.66
Nup43P59235 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nup43P59235 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Nup43P59235 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Nup43P59235 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.95□□□□□ -0.66
Nup43P59235 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Nup43P59235 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Nup43P59235 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.94□□□□□ -0.66
Nup43P59235 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Nup43P59235 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.94□□□□□ -0.66
Nup43P59235 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm14071-201ENSMUST00000117817 509 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.94□□□□□ -0.66
Nup43P59235 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.94□□□□□ -0.66
Nup43P59235 Gm3150-201ENSMUST00000166418 204 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Gm26461-201ENSMUST00000175064 290 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Mir5132-201ENSMUST00000175166 71 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.94□□□□□ -0.66
Nup43P59235 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm19353-201ENSMUST00000184561 445 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Gm9540-201ENSMUST00000188230 478 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC10.94□□□□□ -0.66
Nup43P59235 Gm37835-201ENSMUST00000193305 361 ntBASIC10.94□□□□□ -0.66
Nup43P59235 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.94□□□□□ -0.66
Nup43P59235 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Nup43P59235 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Nup43P59235 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms