Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm12164-201ENSMUST00000121695 551 ntBASIC12.9□□□□□ -0.34
Tpm1P58771 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.9□□□□□ -0.34
Tpm1P58771 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.9□□□□□ -0.34
Tpm1P58771 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm27731-201ENSMUST00000185192 107 ntBASIC12.9□□□□□ -0.34
Tpm1P58771 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm7653-201ENSMUST00000214567 508 ntBASIC12.9□□□□□ -0.34
Tpm1P58771 Gm19994-201ENSMUST00000217086 586 ntBASIC12.9□□□□□ -0.34
Tpm1P58771 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tpm1P58771 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tpm1P58771 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tpm1P58771 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tpm1P58771 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Tpm1P58771 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tpm1P58771 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tpm1P58771 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tpm1P58771 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Tpm1P58771 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Tpm1P58771 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Tpm1P58771 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tpm1P58771 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm4986-201ENSMUST00000119731 549 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.89□□□□□ -0.35
Tpm1P58771 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm24845-201ENSMUST00000158034 109 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm18893-201ENSMUST00000198416 943 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.89□□□□□ -0.35
Tpm1P58771 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.89□□□□□ -0.35
Tpm1P58771 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tpm1P58771 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.89□□□□□ -0.35
Tpm1P58771 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tpm1P58771 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.88□□□□□ -0.35
Tpm1P58771 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.88□□□□□ -0.35
Tpm1P58771 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Gm37008-201ENSMUST00000195712 319 ntBASIC12.88□□□□□ -0.35
Tpm1P58771 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.88□□□□□ -0.35
Tpm1P58771 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tpm1P58771 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tpm1P58771 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms