Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Abcd3P55096 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Gm14724-201ENSMUST00000118400 537 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Gm14208-201ENSMUST00000119645 678 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.37□□□□□ -0.75
Abcd3P55096 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.37□□□□□ -0.75
Abcd3P55096 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Gm5363-201ENSMUST00000211927 938 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Erich3-203ENSMUST00000189969 3460 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.37□□□□□ -0.75
Abcd3P55096 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.37□□□□□ -0.75
Abcd3P55096 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Abcd3P55096 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.37□□□□□ -0.75
Abcd3P55096 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Abcd3P55096 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Abcd3P55096 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Abcd3P55096 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.37□□□□□ -0.75
Abcd3P55096 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.36□□□□□ -0.75
Abcd3P55096 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm3329-201ENSMUST00000159873 556 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm16505-201ENSMUST00000179981 232 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.36□□□□□ -0.75
Abcd3P55096 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm38151-201ENSMUST00000195085 289 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm2965-201ENSMUST00000198365 343 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm45186-201ENSMUST00000206874 478 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm45575-201ENSMUST00000210283 548 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Abcd3P55096 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.36□□□□□ -0.75
Abcd3P55096 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.36□□□□□ -0.75
Abcd3P55096 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms