Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Sox3P53784 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox3P53784 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox3P53784 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.17□□□□□ -0.62
Sox3P53784 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sox3P53784 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Gm13937-201ENSMUST00000121000 988 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox3P53784 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox3P53784 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox3P53784 Gm27530-201ENSMUST00000184096 98 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Gm43184-201ENSMUST00000197247 542 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Gm35713-201ENSMUST00000210516 199 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Mt1-202ENSMUST00000211807 1085 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox3P53784 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.16□□□□□ -0.62
Sox3P53784 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox3P53784 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.16□□□□□ -0.62
Sox3P53784 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.16□□□□□ -0.62
Sox3P53784 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox3P53784 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox3P53784 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox3P53784 Gm13549-201ENSMUST00000118339 796 ntBASIC11.15□□□□□ -0.62
Sox3P53784 Gm16071-201ENSMUST00000119589 793 ntBASIC11.15□□□□□ -0.62
Sox3P53784 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox3P53784 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.15□□□□□ -0.62
Sox3P53784 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.15□□□□□ -0.62
Sox3P53784 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Gm17826-201ENSMUST00000189720 798 ntBASIC11.15□□□□□ -0.62
Sox3P53784 Gm43610-201ENSMUST00000199117 365 ntBASIC11.15□□□□□ -0.62
Sox3P53784 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox3P53784 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox3P53784 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox3P53784 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Sox3P53784 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox3P53784 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox3P53784 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox3P53784 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.15□□□□□ -0.62
Sox3P53784 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox3P53784 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sox3P53784 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sox3P53784 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Sox3P53784 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.14□□□□□ -0.63
Sox3P53784 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sox3P53784 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sox3P53784 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sox3P53784 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Sox3P53784 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms