Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.87□□□□□ -0.51
Sox1P53783 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox1P53783 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sox1P53783 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.87□□□□□ -0.51
Sox1P53783 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Sox1P53783 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox1P53783 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Gm22495-201ENSMUST00000104492 126 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Gm12247-201ENSMUST00000117585 670 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm16209-201ENSMUST00000118457 627 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm16210-201ENSMUST00000122161 610 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm22344-201ENSMUST00000122642 278 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm10171-201ENSMUST00000126220 628 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.86□□□□□ -0.51
Sox1P53783 Gm16441-201ENSMUST00000138176 924 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.86□□□□□ -0.51
Sox1P53783 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Gm27444-201ENSMUST00000184157 137 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm28937-201ENSMUST00000185413 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm29400-201ENSMUST00000187208 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm28662-201ENSMUST00000188446 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm28251-201ENSMUST00000188835 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm37318-201ENSMUST00000194325 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm38017-201ENSMUST00000194768 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm37287-201ENSMUST00000195449 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm37793-201ENSMUST00000195548 695 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm43966-201ENSMUST00000203301 612 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox1P53783 Gm10233-201ENSMUST00000089275 628 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox1P53783 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sox1P53783 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sox1P53783 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sox1P53783 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.86□□□□□ -0.51
Sox1P53783 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Sox1P53783 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sox1P53783 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Gm24933-201ENSMUST00000103762 110 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Gm23252-201ENSMUST00000103776 110 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Gm11952-201ENSMUST00000121172 821 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.85□□□□□ -0.51
Sox1P53783 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Gm26443-201ENSMUST00000179610 110 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Gm5706-201ENSMUST00000181525 993 ntBASIC11.85□□□□□ -0.51
Sox1P53783 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC11.85□□□□□ -0.51
Sox1P53783 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.85□□□□□ -0.51
Sox1P53783 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.85□□□□□ -0.51
Sox1P53783 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Gm7242-201ENSMUST00000221134 705 ntBASIC11.85□□□□□ -0.51
Sox1P53783 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.85□□□□□ -0.51
Sox1P53783 AC154433.1-201ENSMUST00000224401 1183 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms