Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Prox1P48437 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Prox1P48437 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Prox1P48437 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.13□□□□□ -0.63
Prox1P48437 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Prox1P48437 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.13□□□□□ -0.63
Prox1P48437 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Gm38241-201ENSMUST00000192641 898 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Gm3961-201ENSMUST00000204425 994 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Gm17931-201ENSMUST00000208132 634 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.13□□□□□ -0.63
Prox1P48437 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Prox1P48437 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Prox1P48437 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Prox1P48437 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Prox1P48437 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Prox1P48437 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.12□□□□□ -0.63
Prox1P48437 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.12□□□□□ -0.63
Prox1P48437 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.12□□□□□ -0.63
Prox1P48437 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Prox1P48437 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Gm38266-201ENSMUST00000194931 421 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.12□□□□□ -0.63
Prox1P48437 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.12□□□□□ -0.63
Prox1P48437 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.12□□□□□ -0.63
Prox1P48437 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Prox1P48437 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Prox1P48437 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Prox1P48437 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms