Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rfx3P48381 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.47□□□□□ -0.73
Rfx3P48381 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm13296-201ENSMUST00000117854 997 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.47□□□□□ -0.73
Rfx3P48381 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm6114-201ENSMUST00000182472 968 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.47□□□□□ -0.73
Rfx3P48381 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm19287-201ENSMUST00000203190 358 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.47□□□□□ -0.73
Rfx3P48381 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.47□□□□□ -0.73
Rfx3P48381 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Rfx3P48381 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Rfx3P48381 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.46□□□□□ -0.73
Rfx3P48381 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.46□□□□□ -0.73
Rfx3P48381 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.46□□□□□ -0.73
Rfx3P48381 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Rfx3P48381 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.46□□□□□ -0.73
Rfx3P48381 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Rfx3P48381 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.46□□□□□ -0.73
Rfx3P48381 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.46□□□□□ -0.73
Rfx3P48381 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.46□□□□□ -0.73
Rfx3P48381 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Gm7584-201ENSMUST00000175829 940 ntBASIC10.46□□□□□ -0.73
Rfx3P48381 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.46□□□□□ -0.73
Rfx3P48381 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Gm43002-201ENSMUST00000200310 155 ntBASIC10.46□□□□□ -0.73
Rfx3P48381 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.46□□□□□ -0.73
Rfx3P48381 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.46□□□□□ -0.73
Rfx3P48381 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Rfx3P48381 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Rfx3P48381 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Rfx3P48381 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.46□□□□□ -0.74
Rfx3P48381 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Rfx3P48381 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
Rfx3P48381 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.46□□□□□ -0.74
Rfx3P48381 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms