Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Gm5605-201ENSMUST00000208940 1305 ntBASIC11.38□□□□□ -0.59
Sox18P43680 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox18P43680 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox18P43680 Gm23776-201ENSMUST00000158993 325 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.38□□□□□ -0.59
Sox18P43680 Gm7289-201ENSMUST00000168993 734 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Gm37866-201ENSMUST00000191950 696 ntBASIC11.38□□□□□ -0.59
Sox18P43680 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox18P43680 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm34701-202ENSMUST00000204685 360 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Gm44506-201ENSMUST00000206278 965 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Gm45401-201ENSMUST00000209456 733 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Sox18P43680 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 AC134860.5-201ENSMUST00000225071 1249 ntBASIC11.38□□□□□ -0.59
Sox18P43680 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox18P43680 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.38□□□□□ -0.59
Sox18P43680 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Sox18P43680 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox18P43680 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox18P43680 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
Sox18P43680 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox18P43680 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox18P43680 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox18P43680 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Gm14807-201ENSMUST00000116640 983 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
Sox18P43680 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox18P43680 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox18P43680 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox18P43680 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Sox18P43680 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC11.37□□□□□ -0.59
Sox18P43680 Gm19175-201ENSMUST00000199895 916 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Gm43894-201ENSMUST00000203274 688 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Gm5340-201ENSMUST00000203733 880 ntBASIC11.37□□□□□ -0.59
Sox18P43680 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.37□□□□□ -0.59
Sox18P43680 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox18P43680 AC122924.1-201ENSMUST00000222044 163 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms