Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Erich3-203ENSMUST00000189969 3460 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm14193-201ENSMUST00000105067 153 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm24844-201ENSMUST00000158679 127 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm37246-201ENSMUST00000192665 835 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm37835-201ENSMUST00000193305 361 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm1821-202ENSMUST00000227415 750 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nkx2-2P42586 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.61□□□□□ -0.71
Nkx2-2P42586 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.6□□□□□ -0.71
Nkx2-2P42586 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm22711-201ENSMUST00000116890 133 ntBASIC10.6□□□□□ -0.71
Nkx2-2P42586 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm44506-201ENSMUST00000206278 965 ntBASIC10.6□□□□□ -0.71
Nkx2-2P42586 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.6□□□□□ -0.71
Nkx2-2P42586 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.6□□□□□ -0.71
Nkx2-2P42586 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nkx2-2P42586 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Gm22920-201ENSMUST00000102175 109 ntBASIC10.59□□□□□ -0.71
Nkx2-2P42586 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nkx2-2P42586 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms