Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.91□□□□□ -0.5
Cxcl12P40224 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.91□□□□□ -0.5
Cxcl12P40224 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Gm6564-201ENSMUST00000075377 619 ntBASIC11.91□□□□□ -0.5
Cxcl12P40224 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcl12P40224 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cxcl12P40224 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.91□□□□□ -0.5
Cxcl12P40224 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.91□□□□□ -0.5
Cxcl12P40224 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl12P40224 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.91□□□□□ -0.5
Cxcl12P40224 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Grk6-205ENSMUST00000224653 2976 ntBASIC11.9□□□□□ -0.5
Cxcl12P40224 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.9□□□□□ -0.5
Cxcl12P40224 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm7765-201ENSMUST00000182585 974 ntBASIC11.9□□□□□ -0.5
Cxcl12P40224 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.9□□□□□ -0.5
Cxcl12P40224 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cxcl12P40224 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.9□□□□□ -0.5
Cxcl12P40224 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Cxcl12P40224 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.9□□□□□ -0.5
Cxcl12P40224 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cxcl12P40224 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl12P40224 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl12P40224 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl12P40224 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.9□□□□□ -0.51
Cxcl12P40224 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cxcl12P40224 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm13171-201ENSMUST00000117233 391 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm15707-201ENSMUST00000118804 996 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm8019-201ENSMUST00000119317 587 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.89□□□□□ -0.51
Cxcl12P40224 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.89□□□□□ -0.51
Cxcl12P40224 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms