Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC16.98■□□□□ 0.31
Chd1P40201 Gm5766-202ENSMUST00000161633 799 ntBASIC16.98■□□□□ 0.31
Chd1P40201 Gm17147-201ENSMUST00000164176 432 ntBASIC16.98■□□□□ 0.31
Chd1P40201 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd1P40201 Gm19058-201ENSMUST00000192135 598 ntBASIC16.98■□□□□ 0.31
Chd1P40201 Gm37944-201ENSMUST00000194233 414 ntBASIC16.98■□□□□ 0.31
Chd1P40201 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC16.98■□□□□ 0.31
Chd1P40201 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Gm25483-201ENSMUST00000083224 227 ntBASIC16.98■□□□□ 0.31
Chd1P40201 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.98■□□□□ 0.31
Chd1P40201 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1P40201 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Chd1P40201 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1P40201 Gm9095-201ENSMUST00000117607 881 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Gm9097-201ENSMUST00000120514 880 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Chd1P40201 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC16.97■□□□□ 0.31
Chd1P40201 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC16.97■□□□□ 0.31
Chd1P40201 Gm20474-201ENSMUST00000180089 596 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Mir6396-201ENSMUST00000183603 111 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Gm5851-201ENSMUST00000194132 1204 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Gm42617-201ENSMUST00000197640 1229 ntBASIC16.97■□□□□ 0.31
Chd1P40201 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1P40201 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chd1P40201 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Chd1P40201 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1P40201 Gm22661-201ENSMUST00000104192 132 ntBASIC16.96■□□□□ 0.31
Chd1P40201 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1P40201 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.96■□□□□ 0.31
Chd1P40201 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC16.96■□□□□ 0.31
Chd1P40201 Gm8960-201ENSMUST00000219787 788 ntBASIC16.96■□□□□ 0.31
Chd1P40201 Gm5194-201ENSMUST00000221457 742 ntBASIC16.96■□□□□ 0.31
Chd1P40201 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chd1P40201 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1P40201 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1P40201 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chd1P40201 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1P40201 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1P40201 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC16.96■□□□□ 0.31
Chd1P40201 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1P40201 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1P40201 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1P40201 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1P40201 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC16.96■□□□□ 0.3
Chd1P40201 Gm12961-201ENSMUST00000120507 1050 ntBASIC16.96■□□□□ 0.3
Chd1P40201 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC16.96■□□□□ 0.3
Chd1P40201 Gm12254-201ENSMUST00000134617 471 ntBASIC16.96■□□□□ 0.3
Chd1P40201 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC16.96■□□□□ 0.3
Chd1P40201 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Chd1P40201 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Chd1P40201 Gm21963-201ENSMUST00000179519 330 ntBASIC16.96■□□□□ 0.3
Chd1P40201 Gm18443-201ENSMUST00000185358 556 ntBASIC16.96■□□□□ 0.3
Chd1P40201 AC130217.1-201ENSMUST00000224146 909 ntBASIC16.96■□□□□ 0.3
Chd1P40201 AC114585.2-201ENSMUST00000227693 486 ntBASIC16.96■□□□□ 0.3
Chd1P40201 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1P40201 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Gm29100-201ENSMUST00000187564 4410 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Chd1P40201 AC155245.1-201ENSMUST00000222266 1804 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Ssr1-203ENSMUST00000225246 1825 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Chd1P40201 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 CT025624.1-201ENSMUST00000224007 2700 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms