Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.13□□□□□ -0.63
Cdh4P39038 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Cdh4P39038 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Rgr-203ENSMUST00000225070 4704 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cdh4P39038 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Gm15566-201ENSMUST00000121130 590 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 Mir8093-201ENSMUST00000185043 137 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm5982-201ENSMUST00000196234 512 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Gm18753-201ENSMUST00000201000 566 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm45113-201ENSMUST00000207518 165 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Gm6108-201ENSMUST00000208365 367 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.12□□□□□ -0.63
Cdh4P39038 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.12□□□□□ -0.63
Cdh4P39038 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cdh4P39038 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh4P39038 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh4P39038 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdh4P39038 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cdh4P39038 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm12579-201ENSMUST00000118040 783 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Gm11331-201ENSMUST00000119764 288 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh4P39038 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm19353-201ENSMUST00000184561 445 ntBASIC11.11□□□□□ -0.63
Cdh4P39038 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdh4P39038 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdh4P39038 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdh4P39038 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms