Protein–RNA interactions for Protein: P33215

Nedd1, Protein NEDD1, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd1P33215 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Nedd1P33215 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.99□□□□□ -0.33
Nedd1P33215 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.99□□□□□ -0.33
Nedd1P33215 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.99□□□□□ -0.33
Nedd1P33215 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nedd1P33215 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.99□□□□□ -0.33
Nedd1P33215 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.99□□□□□ -0.33
Nedd1P33215 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.99□□□□□ -0.33
Nedd1P33215 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nedd1P33215 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nedd1P33215 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nedd1P33215 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Nedd1P33215 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nedd1P33215 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.98□□□□□ -0.33
Nedd1P33215 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Gm13888-201ENSMUST00000119148 422 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Gm21778-201ENSMUST00000178779 471 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Gm37905-201ENSMUST00000195310 341 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Gm37826-201ENSMUST00000195329 322 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm5468-202ENSMUST00000227851 682 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nedd1P33215 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nedd1P33215 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.98□□□□□ -0.33
Nedd1P33215 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.97□□□□□ -0.33
Nedd1P33215 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nedd1P33215 Gm11451-201ENSMUST00000118946 630 ntBASIC12.97□□□□□ -0.33
Nedd1P33215 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.97□□□□□ -0.33
Nedd1P33215 Olfml3-204ENSMUST00000169286 874 ntBASIC12.97□□□□□ -0.33
Nedd1P33215 Mir3547-201ENSMUST00000175461 88 ntBASIC12.97□□□□□ -0.33
Nedd1P33215 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC12.97□□□□□ -0.33
Nedd1P33215 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.97□□□□□ -0.33
Nedd1P33215 Gm37284-201ENSMUST00000193607 539 ntBASIC12.97□□□□□ -0.33
Nedd1P33215 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.97□□□□□ -0.33
Nedd1P33215 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nedd1P33215 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nedd1P33215 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.96□□□□□ -0.33
Nedd1P33215 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms