Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col2a1P28481 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col2a1P28481 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Col2a1P28481 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.99□□□□□ -0.33
Col2a1P28481 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.99□□□□□ -0.33
Col2a1P28481 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col2a1P28481 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.99□□□□□ -0.33
Col2a1P28481 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm23612-201ENSMUST00000103823 110 ntBASIC12.98□□□□□ -0.33
Col2a1P28481 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm6158-201ENSMUST00000109467 904 ntBASIC12.98□□□□□ -0.33
Col2a1P28481 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm25830-201ENSMUST00000158923 132 ntBASIC12.98□□□□□ -0.33
Col2a1P28481 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm23576-201ENSMUST00000179918 110 ntBASIC12.98□□□□□ -0.33
Col2a1P28481 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.98□□□□□ -0.33
Col2a1P28481 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.98□□□□□ -0.33
Col2a1P28481 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Col2a1P28481 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Col2a1P28481 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col2a1P28481 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col2a1P28481 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col2a1P28481 Gm12986-201ENSMUST00000119037 967 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm22146-201ENSMUST00000157397 288 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col2a1P28481 Snord55-201ENSMUST00000174939 79 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm26989-201ENSMUST00000182608 749 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Mir7035-201ENSMUST00000184713 82 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm34379-201ENSMUST00000195036 290 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm42430-201ENSMUST00000197209 616 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Gm9487-201ENSMUST00000216600 472 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col2a1P28481 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col2a1P28481 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col2a1P28481 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.97□□□□□ -0.33
Col2a1P28481 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms