Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm44506-201ENSMUST00000206278 965 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Gm44551-201ENSMUST00000208804 171 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC9.66□□□□□ -0.86
Col8a2P25318 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.66□□□□□ -0.86
Col8a2P25318 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Gm9826-201ENSMUST00000029124 1299 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Gm23105-201ENSMUST00000083719 134 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Col8a2P25318 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Col8a2P25318 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Col8a2P25318 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.66□□□□□ -0.86
Col8a2P25318 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Col8a2P25318 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.66□□□□□ -0.86
Col8a2P25318 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Col8a2P25318 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.65□□□□□ -0.86
Col8a2P25318 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.65□□□□□ -0.86
Col8a2P25318 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.65□□□□□ -0.86
Col8a2P25318 Gm9645-201ENSMUST00000197131 792 ntBASIC9.65□□□□□ -0.86
Col8a2P25318 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Lect2-202ENSMUST00000225183 823 ntBASIC9.65□□□□□ -0.86
Col8a2P25318 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Col8a2P25318 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Col8a2P25318 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Col8a2P25318 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Col8a2P25318 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.65□□□□□ -0.87
Col8a2P25318 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Col8a2P25318 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Col8a2P25318 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Col8a2P25318 Gm43760-201ENSMUST00000202120 3015 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Col8a2P25318 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Col8a2P25318 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Col8a2P25318 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.64□□□□□ -0.87
Col8a2P25318 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Col8a2P25318 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.64□□□□□ -0.87
Col8a2P25318 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Col8a2P25318 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Col8a2P25318 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms