Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm11222-201ENSMUST00000119005 738 ntBASIC11.15□□□□□ -0.62
BdnfP21237 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.15□□□□□ -0.62
BdnfP21237 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
BdnfP21237 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.15□□□□□ -0.62
BdnfP21237 Gm6114-201ENSMUST00000182472 968 ntBASIC11.15□□□□□ -0.62
BdnfP21237 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.15□□□□□ -0.62
BdnfP21237 Mir8109-201ENSMUST00000184375 117 ntBASIC11.15□□□□□ -0.62
BdnfP21237 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.15□□□□□ -0.62
BdnfP21237 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.15□□□□□ -0.62
BdnfP21237 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.15□□□□□ -0.62
BdnfP21237 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Gzmn-202ENSMUST00000225535 989 ntBASIC11.15□□□□□ -0.62
BdnfP21237 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
BdnfP21237 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
BdnfP21237 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.15□□□□□ -0.62
BdnfP21237 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
BdnfP21237 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
BdnfP21237 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.15□□□□□ -0.62
BdnfP21237 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
BdnfP21237 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
BdnfP21237 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
BdnfP21237 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
BdnfP21237 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
BdnfP21237 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.15□□□□□ -0.63
BdnfP21237 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Mmp9-201ENSMUST00000017881 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.14□□□□□ -0.63
BdnfP21237 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
BdnfP21237 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.14□□□□□ -0.63
BdnfP21237 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.14□□□□□ -0.63
BdnfP21237 Gm14726-201ENSMUST00000120623 896 ntBASIC11.14□□□□□ -0.63
BdnfP21237 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.14□□□□□ -0.63
BdnfP21237 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm9230-201ENSMUST00000188228 532 ntBASIC11.14□□□□□ -0.63
BdnfP21237 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.14□□□□□ -0.63
BdnfP21237 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
BdnfP21237 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC11.14□□□□□ -0.63
BdnfP21237 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
BdnfP21237 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.14□□□□□ -0.63
BdnfP21237 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
BdnfP21237 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.13□□□□□ -0.63
BdnfP21237 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.13□□□□□ -0.63
BdnfP21237 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
BdnfP21237 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms