Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Sdc1P18828 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Gm22058-201ENSMUST00000083393 310 ntBASIC9.44□□□□□ -0.9
Sdc1P18828 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.44□□□□□ -0.9
Sdc1P18828 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Sdc1P18828 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Sdc1P18828 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.43□□□□□ -0.9
Sdc1P18828 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm13369-201ENSMUST00000119442 987 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm24513-201ENSMUST00000174964 138 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm27306-201ENSMUST00000183970 107 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Gm27397-201ENSMUST00000184997 107 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Gm38671-201ENSMUST00000200573 130 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm10146-201ENSMUST00000072739 309 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.43□□□□□ -0.9
Sdc1P18828 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Sdc1P18828 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Sdc1P18828 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.42□□□□□ -0.9
Sdc1P18828 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.42□□□□□ -0.9
Sdc1P18828 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sdc1P18828 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.42□□□□□ -0.9
Sdc1P18828 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Sdc1P18828 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sdc1P18828 Gm43966-201ENSMUST00000203301 612 ntBASIC9.42□□□□□ -0.9
Sdc1P18828 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Sdc1P18828 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms